Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Super-spreaders and the rate of transmission of the SARS virus

Identifieur interne : 001043 ( Pmc/Checkpoint ); précédent : 001042; suivant : 001044

Super-spreaders and the rate of transmission of the SARS virus

Auteurs : Michael Small [Hong Kong] ; C. K. Tse [Hong Kong] ; David M. Walker [Royaume-Uni]

Source :

RBID : PMC:7114355

Abstract

We describe a stochastic small-world network model of transmission of the SARS virus. Unlike the standard Susceptible-Infected-Removed models of disease transmission, our model exhibits both geographically localised outbreaks and “super-spreaders”. Moreover, the combination of localised and long range links allows for more accurate modelling of partial isolation and various public health policies. From this model, we derive an expression for the probability of a widespread outbreak and a condition to ensure that the epidemic is controlled. Moreover, multiple simulations are used to make predictions of the likelihood of various eventual scenarios for fixed initial conditions. The main conclusions of this study are: (i) “super-spreaders” may occur even if the infectiousness of all infected individuals is constant; (ii) consistent with previous reports, extended exposure time beyond 3–5 days (i.e. significant nosocomial transmission) was the key factor in the severity of the SARS outbreak in Hong Kong; and, (iii) the spread of SARS can be effectively controlled by either limiting long range links (imposing a partial quarantine) or enforcing rapid hospitalisation and isolation of symptomatic individuals.


Url:
DOI: 10.1016/j.physd.2006.01.021
PubMed: NONE
PubMed Central: 7114355


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

PMC:7114355

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Super-spreaders and the rate of transmission of the SARS virus</title>
<author>
<name sortKey="Small, Michael" sort="Small, Michael" uniqKey="Small M" first="Michael" last="Small">Michael Small</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong</nlm:aff>
<country xml:lang="fr">Hong Kong</country>
<wicri:regionArea>Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon</wicri:regionArea>
<wicri:noRegion>Kowloon</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tse, C K" sort="Tse, C K" uniqKey="Tse C" first="C. K." last="Tse">C. K. Tse</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong</nlm:aff>
<country xml:lang="fr">Hong Kong</country>
<wicri:regionArea>Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon</wicri:regionArea>
<wicri:noRegion>Kowloon</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Walker, David M" sort="Walker, David M" uniqKey="Walker D" first="David M." last="Walker">David M. Walker</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">Biomathematics and Statistics Scotland, Macaulay Institute, Craigbuckler, Aberdeen AB15 8QH, UK</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Biomathematics and Statistics Scotland, Macaulay Institute, Craigbuckler, Aberdeen AB15 8QH</wicri:regionArea>
<wicri:noRegion>Aberdeen AB15 8QH</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmc">7114355</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7114355</idno>
<idno type="RBID">PMC:7114355</idno>
<idno type="doi">10.1016/j.physd.2006.01.021</idno>
<idno type="pmid">NONE</idno>
<date when="2006">2006</date>
<idno type="wicri:Area/Pmc/Corpus">001435</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001435</idno>
<idno type="wicri:Area/Pmc/Curation">001435</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001435</idno>
<idno type="wicri:Area/Pmc/Checkpoint">001043</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">001043</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Super-spreaders and the rate of transmission of the SARS virus</title>
<author>
<name sortKey="Small, Michael" sort="Small, Michael" uniqKey="Small M" first="Michael" last="Small">Michael Small</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong</nlm:aff>
<country xml:lang="fr">Hong Kong</country>
<wicri:regionArea>Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon</wicri:regionArea>
<wicri:noRegion>Kowloon</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tse, C K" sort="Tse, C K" uniqKey="Tse C" first="C. K." last="Tse">C. K. Tse</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong</nlm:aff>
<country xml:lang="fr">Hong Kong</country>
<wicri:regionArea>Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon</wicri:regionArea>
<wicri:noRegion>Kowloon</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Walker, David M" sort="Walker, David M" uniqKey="Walker D" first="David M." last="Walker">David M. Walker</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">Biomathematics and Statistics Scotland, Macaulay Institute, Craigbuckler, Aberdeen AB15 8QH, UK</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Biomathematics and Statistics Scotland, Macaulay Institute, Craigbuckler, Aberdeen AB15 8QH</wicri:regionArea>
<wicri:noRegion>Aberdeen AB15 8QH</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Physica D. Nonlinear Phenomena</title>
<idno type="ISSN">0167-2789</idno>
<idno type="eISSN">0167-2789</idno>
<imprint>
<date when="2006">2006</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>We describe a stochastic small-world network model of transmission of the SARS virus. Unlike the standard Susceptible-Infected-Removed models of disease transmission, our model exhibits both geographically localised outbreaks and “super-spreaders”. Moreover, the combination of localised and long range links allows for more accurate modelling of partial isolation and various public health policies. From this model, we derive an expression for the probability of a widespread outbreak and a condition to ensure that the epidemic is controlled. Moreover, multiple simulations are used to make predictions of the likelihood of various eventual scenarios for fixed initial conditions. The main conclusions of this study are: (i) “super-spreaders” may occur even if the infectiousness of all infected individuals is constant; (ii) consistent with previous reports, extended exposure time beyond 3–5 days (i.e. significant nosocomial transmission) was the key factor in the severity of the SARS outbreak in Hong Kong; and, (iii) the spread of SARS can be effectively controlled by either limiting long range links (imposing a partial quarantine) or enforcing rapid hospitalisation and isolation of symptomatic individuals.</p>
</div>
</front>
<back>
<div1 type="bibliography">
<listBibl>
<biblStruct>
<analytic>
<author>
<name sortKey="Moira, C Y" uniqKey="Moira C">C.-Y. Moira</name>
</author>
<author>
<name sortKey="Xu, R H" uniqKey="Xu R">R.-H. Xu</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Riley, S" uniqKey="Riley S">S. Riley</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wong, T W" uniqKey="Wong T">T.-W. Wong</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Donnelly, C A" uniqKey="Donnelly C">C.A. Donnelly</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Murray, J D" uniqKey="Murray J">J.D. Murray</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Koopman, J" uniqKey="Koopman J">J. Koopman</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Ferguson, N M" uniqKey="Ferguson N">N.M. Ferguson</name>
</author>
<author>
<name sortKey="Garnet, G P" uniqKey="Garnet G">G.P. Garnet</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Bauch, C T" uniqKey="Bauch C">C.T. Bauch</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Handcock, M S" uniqKey="Handcock M">M.S. Handcock</name>
</author>
<author>
<name sortKey="Jones, J H" uniqKey="Jones J">J.H. Jones</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Ball, F" uniqKey="Ball F">F. Ball</name>
</author>
<author>
<name sortKey="Neal, P" uniqKey="Neal P">P. Neal</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Hufnagel, L" uniqKey="Hufnagel L">L. Hufnagel</name>
</author>
<author>
<name sortKey="Brockmann, D" uniqKey="Brockmann D">D. Brockmann</name>
</author>
<author>
<name sortKey="Geisel, T" uniqKey="Geisel T">T. Geisel</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Watts, D J" uniqKey="Watts D">D.J. Watts</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Watts, D J" uniqKey="Watts D">D.J. Watts</name>
</author>
<author>
<name sortKey="Strogatz, S H" uniqKey="Strogatz S">S.H. Strogatz</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Small, M" uniqKey="Small M">M. Small</name>
</author>
<author>
<name sortKey="Tse, C K" uniqKey="Tse C">C.K. Tse</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Galvani, A P" uniqKey="Galvani A">A.P. Galvani</name>
</author>
<author>
<name sortKey="May, R M" uniqKey="May R">R.M. May</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Diekmann, O" uniqKey="Diekmann O">O. Diekmann</name>
</author>
<author>
<name sortKey="Heesterbeek, J A P" uniqKey="Heesterbeek J">J.A.P. Heesterbeek</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Pastor Satorras, R" uniqKey="Pastor Satorras R">R. Pastor-Satorras</name>
</author>
<author>
<name sortKey="Vespignani, A" uniqKey="Vespignani A">A. Vespignani</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Pastor Satorras, R" uniqKey="Pastor Satorras R">R. Pastor-Satorras</name>
</author>
<author>
<name sortKey="Vespignani, A" uniqKey="Vespignani A">A. Vespignani</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="O Eill, P D" uniqKey="O Eill P">P.D. O’Neill</name>
</author>
<author>
<name sortKey="Roberts, G O" uniqKey="Roberts G">G.O. Roberts</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Lau, J T F" uniqKey="Lau J">J.T.F. Lau</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Sattenspeil, L" uniqKey="Sattenspeil L">L. Sattenspeil</name>
</author>
<author>
<name sortKey="Herring, D A" uniqKey="Herring D">D.A. Herring</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<pmc article-type="research-article">
<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Physica D</journal-id>
<journal-id journal-id-type="iso-abbrev">Physica D</journal-id>
<journal-title-group>
<journal-title>Physica D. Nonlinear Phenomena</journal-title>
</journal-title-group>
<issn pub-type="ppub">0167-2789</issn>
<issn pub-type="epub">0167-2789</issn>
<publisher>
<publisher-name>Elsevier Ltd.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmc">7114355</article-id>
<article-id pub-id-type="publisher-id">S0167-2789(06)00047-9</article-id>
<article-id pub-id-type="doi">10.1016/j.physd.2006.01.021</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Article</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Super-spreaders and the rate of transmission of the SARS virus</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Small</surname>
<given-names>Michael</given-names>
</name>
<email>ensmall@polyu.edu.hk</email>
<xref rid="aff1" ref-type="aff">a</xref>
<xref rid="cor1" ref-type="corresp"></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Tse</surname>
<given-names>C.K.</given-names>
</name>
<xref rid="aff1" ref-type="aff">a</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Walker</surname>
<given-names>David M.</given-names>
</name>
<xref rid="aff2" ref-type="aff">b</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>a</label>
Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong</aff>
<aff id="aff2">
<label>b</label>
Biomathematics and Statistics Scotland, Macaulay Institute, Craigbuckler, Aberdeen AB15 8QH, UK</aff>
<author-notes>
<corresp id="cor1">
<label></label>
Corresponding author. Tel.: +852 2766 4744; fax: +852 2362 8439.
<email>ensmall@polyu.edu.hk</email>
</corresp>
</author-notes>
<pub-date pub-type="pmc-release">
<day>10</day>
<month>3</month>
<year>2006</year>
</pub-date>
<pmc-comment> PMC Release delay is 0 months and 0 days and was based on .</pmc-comment>
<pub-date pub-type="ppub">
<day>15</day>
<month>3</month>
<year>2006</year>
</pub-date>
<pub-date pub-type="epub">
<day>10</day>
<month>3</month>
<year>2006</year>
</pub-date>
<volume>215</volume>
<issue>2</issue>
<fpage>146</fpage>
<lpage>158</lpage>
<history>
<date date-type="received">
<day>13</day>
<month>6</month>
<year>2005</year>
</date>
<date date-type="rev-recd">
<day>28</day>
<month>11</month>
<year>2005</year>
</date>
<date date-type="accepted">
<day>30</day>
<month>1</month>
<year>2006</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright © 2006 Elsevier Ltd. All rights reserved.</copyright-statement>
<copyright-year>2006</copyright-year>
<copyright-holder>Elsevier Ltd</copyright-holder>
<license>
<license-p>Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.</license-p>
</license>
</permissions>
<abstract>
<p>We describe a stochastic small-world network model of transmission of the SARS virus. Unlike the standard Susceptible-Infected-Removed models of disease transmission, our model exhibits both geographically localised outbreaks and “super-spreaders”. Moreover, the combination of localised and long range links allows for more accurate modelling of partial isolation and various public health policies. From this model, we derive an expression for the probability of a widespread outbreak and a condition to ensure that the epidemic is controlled. Moreover, multiple simulations are used to make predictions of the likelihood of various eventual scenarios for fixed initial conditions. The main conclusions of this study are: (i) “super-spreaders” may occur even if the infectiousness of all infected individuals is constant; (ii) consistent with previous reports, extended exposure time beyond 3–5 days (i.e. significant nosocomial transmission) was the key factor in the severity of the SARS outbreak in Hong Kong; and, (iii) the spread of SARS can be effectively controlled by either limiting long range links (imposing a partial quarantine) or enforcing rapid hospitalisation and isolation of symptomatic individuals.</p>
</abstract>
<kwd-group>
<title>Keywords</title>
<kwd>Severe Acute Respiratory Syndrome (SARS)</kwd>
<kwd>Small-world network</kwd>
<kwd>Transmission dynamics</kwd>
<kwd>Super-spreader event</kwd>
</kwd-group>
</article-meta>
<notes>
<p>Communicated by H. Levine</p>
</notes>
</front>
</pmc>
<affiliations>
<list>
<country>
<li>Hong Kong</li>
<li>Royaume-Uni</li>
</country>
</list>
<tree>
<country name="Hong Kong">
<noRegion>
<name sortKey="Small, Michael" sort="Small, Michael" uniqKey="Small M" first="Michael" last="Small">Michael Small</name>
</noRegion>
<name sortKey="Tse, C K" sort="Tse, C K" uniqKey="Tse C" first="C. K." last="Tse">C. K. Tse</name>
</country>
<country name="Royaume-Uni">
<noRegion>
<name sortKey="Walker, David M" sort="Walker, David M" uniqKey="Walker D" first="David M." last="Walker">David M. Walker</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Pmc/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001043 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Pmc/Checkpoint/biblio.hfd -nk 001043 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    Pmc
   |étape=   Checkpoint
   |type=    RBID
   |clé=     PMC:7114355
   |texte=   Super-spreaders and the rate of transmission of the SARS virus
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Checkpoint/RBID.i   -Sk "pubmed:NONE" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Checkpoint/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021